BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033G08LP1|AL429800
(869 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig508 1715 0.0
>3x_Contig508
Length = 2437
Score = 1715 bits (865), Expect = 0.0
Identities = 868/869 (99%)
Strand = Plus / Plus
Query: 1 gccagcgatatcaacgggctctcccactagctctagtgctcgtctaacgtctgtatctag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 gccagcgatatcaacgggctctcccactagctctagtgctcgtctaacgtctgtatctag 108
Query: 61 agtaggcacaattttgagcctttcttgcctttggaattccaatcttttcagagcatctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 agtaggcacaattttgagcctttcttgcctttggaattccaatcttttcagagcatctcc 168
Query: 121 gactgattgcccatcctggtttttgtagtcaacatctacctgcaaatcatctaattctac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 gactgattgcccatcctggtttttgtagtcaacatctacctgcaaatcatctaattctac 228
Query: 181 cattagaagttactgcagatagtccaaaggtgagtggttaccggtgccacttttttgatt 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 229 cattagaagttactgcagatagtccaaaggtgagttgttaccggtgccacttttttgatt 288
Query: 241 tcatctctttatcatctcacttctttaaaagcatattcataaaatgaactttatcgttat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 tcatctctttatcatctcacttctttaaaagcatattcataaaatgaactttatcgttat 348
Query: 301 tcctgaatatgaatagttcaaaagttggaaaacaagtgaggtactccatcgagtaaaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 tcctgaatatgaatagttcaaaagttggaaaacaagtgaggtactccatcgagtaaaaag 408
Query: 361 ggtctgaagctaggcgtcgatcgaacgatcatgagtgaacagcagttgttaagagataaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ggtctgaagctaggcgtcgatcgaacgatcatgagtgaacagcagttgttaagagataaa 468
Query: 421 cacattgattatattgcgtctttagatactaagaaagatgatctagagtactggctctca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 cacattgattatattgcgtctttagatactaagaaagatgatctagagtactggctctca 528
Query: 481 gaacatctaaggttgaatggggtatactggggattgacagccctctatctccttgattct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 gaacatctaaggttgaatggggtatactggggattgacagccctctatctccttgattct 588
Query: 541 atcgaaacattcaataaggaggatgtaatacagtttgtcctaagctgttgggatcataaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 atcgaaacattcaataaggaggatgtaatacagtttgtcctaagctgttgggatcataaa 648
Query: 601 actggtgggtttgctgcgtttccaagacatgatggtcatctattaacgactctttcaggg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 actggtgggtttgctgcgtttccaagacatgatggtcatctattaacgactctttcaggg 708
Query: 661 cttcagattttggctacttacaacgctttagagcgcttgggttcagagaagcaagaacaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 cttcagattttggctacttacaacgctttagagcgcttgggttcagagaagcaagaacaa 768
Query: 721 ttggaaaaatttatcctatccaatcaaaaagcagacggctcattccaaggtgatagtttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 ttggaaaaatttatcctatccaatcaaaaagcagacggctcattccaaggtgatagtttt 828
Query: 781 ggtgaagtcgacacacgtttcgtatatactgcattgagctgtttgtccattttacacaaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 ggtgaagtcgacacacgtttcgtatatactgcattgagctgtttgtccattttacacaaa 888
Query: 841 ttgacgaaagaagttgtagaaccagcagt 869
|||||||||||||||||||||||||||||
Sbjct: 889 ttgacgaaagaagttgtagaaccagcagt 917
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6126
Number of Sequences: 1807
Number of extensions: 6126
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 869
length of database: 10,358,551
effective HSP length: 16
effective length of query: 853
effective length of database: 10,329,639
effective search space: 8811182067
effective search space used: 8811182067
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)